Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-8 | SAMN05660350_01850 | Not Available | Positive | 1894000 - 1894809 | 29260.3 |
| hypothetical protein | SAMN05660350_01851 | Not Available | Positive | 1894814 - 1895668 | 29852.9 |
| ferredoxin--nadp+ reductase | SAMN05660350_01852 | Not Available | Positive | 1895881 - 1897293 | 49563.9 |
| 3'(2'), 5'-bisphosphate nucleotidase | SAMN05660350_01853 | Not Available | Negative | 1897329 - 1898438 | 37554.4 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN05660350_01854 | Not Available | Negative | 1898431 - 1901313 | 105110.0 |
| sugar lactone lactonase yvre | SAMN05660350_01855 | Not Available | Positive | 1901459 - 1902394 | 31441.5 |
| sortase a | SAMN05660350_01856 | Not Available | Positive | 1902495 - 1903202 | 24611.1 |
| hypothetical protein | SAMN05660350_01857 | Not Available | Positive | 1903212 - 1903370 | 5777.16 |
| tetratricopeptide repeat-containing protein | SAMN05660350_01858 | Not Available | Negative | 1903463 - 1904347 | 31319.6 |
| abc-2 type transport system permease protein | SAMN05660350_01859 | Not Available | Negative | 1904518 - 1905705 | 40390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

