Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05660350_01820 | Not Available | Positive | 1870386 - 1871564 | 41910.7 |
| transcriptional regulator, marr family | SAMN05660350_01821 | Not Available | Negative | 1871734 - 1872225 | 18209.4 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05660350_01822 | Not Available | Negative | 1872271 - 1873467 | 43182.9 |
| hypothetical protein | SAMN05660350_01823 | Not Available | Negative | 1873720 - 1874187 | 18606.5 |
| dihydrofolate reductase | SAMN05660350_01824 | Not Available | Negative | 1874340 - 1874930 | 20741.3 |
| putative regulatory protein, fmdb family | SAMN05660350_01825 | Not Available | Positive | 1875187 - 1875552 | 11931.1 |
| flp pilus assembly protein cpab | SAMN05660350_01826 | Not Available | Positive | 1875635 - 1876282 | 20868.3 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05660350_01827 | Not Available | Negative | 1876307 - 1877002 | 23725.0 |
| hypothetical protein | SAMN05660350_01828 | Not Available | Positive | 1877093 - 1877455 | 12961.3 |
| uncharacterized domain 1-containing protein | SAMN05660350_01829 | Not Available | Positive | 1877452 - 1877871 | 14546.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

