Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | SAMN05660350_01800 | Not Available | Negative | 1848670 - 1850469 | 65972.4 |
| hypothetical protein | SAMN05660350_01801 | Not Available | Negative | 1850657 - 1851292 | 20732.0 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05660350_01802 | Not Available | Negative | 1851395 - 1852897 | 53106.6 |
| magnesium transporter | SAMN05660350_01803 | Not Available | Positive | 1853003 - 1854097 | 40483.3 |
| protein of unknown function | SAMN05660350_01804 | Not Available | Negative | 1854172 - 1855110 | 34348.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05660350_01805 | Not Available | Negative | 1855179 - 1856018 | 29120.1 |
| c-terminal four tmm region of protein-o-mannosyltransferase | SAMN05660350_01806 | Not Available | Positive | 1856167 - 1857690 | 56147.4 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05660350_01807 | Not Available | Positive | 1857707 - 1858489 | 26739.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_01808 | Not Available | Negative | 1858573 - 1860225 | 57301.4 |
| hypothetical protein | SAMN05660350_01809 | Not Available | Negative | 1860222 - 1861331 | 37860.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

