Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | SAMN05660350_01790 | Not Available | Negative | 1838504 - 1839484 | 35466.8 |
| bifunctional udp-n-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate n-acetyltransferase | SAMN05660350_01791 | Not Available | Negative | 1839533 - 1841029 | 50887.2 |
| Trna-gln | Not Available | Not Available | Positive | 1841055 - 1841127 | Not Available |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05660350_01793 | Not Available | Positive | 1841297 - 1842286 | 36398.0 |
| transcriptional regulator, tetr family | SAMN05660350_01794 | Not Available | Positive | 1842361 - 1842984 | 22379.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05660350_01795 | Not Available | Negative | 1843181 - 1844146 | 32224.3 |
| dimethyladenosine transferase | SAMN05660350_01796 | Not Available | Negative | 1844143 - 1845009 | 30331.7 |
| uncharacterized conserved protein yabe, contains g5 and tandem duf348 domains | SAMN05660350_01797 | Not Available | Negative | 1845018 - 1846118 | 38728.5 |
| hypothetical protein | SAMN05660350_01798 | Not Available | Negative | 1846698 - 1847537 | 29337.9 |
| tatd dnase family protein | SAMN05660350_01799 | Not Available | Negative | 1847766 - 1848629 | 30607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

