Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN05660350_01780 | Not Available | Positive | 1826281 - 1826940 | 22862.6 |
| hypothetical protein | SAMN05660350_01781 | Not Available | Positive | 1827091 - 1827326 | 8165.78 |
| fog: pkd repeat | SAMN05660350_01782 | Not Available | Negative | 1827327 - 1830611 | 111525.0 |
| hypothetical protein | SAMN05660350_01783 | Not Available | Negative | 1830844 - 1831530 | 21766.4 |
| cdp-alcohol phosphatidyltransferase | SAMN05660350_01784 | Not Available | Negative | 1831527 - 1832279 | 25818.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05660350_01785 | Not Available | Negative | 1832276 - 1833547 | 45479.0 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN05660350_01786 | Not Available | Negative | 1833806 - 1835293 | 52814.6 |
| peptidyl-trna hydrolase | SAMN05660350_01787 | Not Available | Negative | 1835489 - 1836076 | 20819.0 |
| lsu ribosomal protein l25p | SAMN05660350_01788 | Not Available | Negative | 1836139 - 1836843 | 24604.9 |
| udpglucose 6-dehydrogenase | SAMN05660350_01789 | Not Available | Positive | 1837095 - 1838441 | 47641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

