Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase lhgo | SAMN05660350_01659 | Not Available | Negative | 1706695 - 1707906 | 43116.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05660350_01660 | Not Available | Positive | 1708048 - 1708935 | 31908.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05660350_01661 | Not Available | Positive | 1708995 - 1709849 | 31238.1 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05660350_01662 | Not Available | Positive | 1709875 - 1710663 | 27380.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05660350_01663 | Not Available | Positive | 1710663 - 1711439 | 27314.5 |
| transcriptional regulator, tetr family | SAMN05660350_01664 | Not Available | Negative | 1711527 - 1712201 | 24597.3 |
| acyl-coa synthetase (ndp forming) | SAMN05660350_01665 | Not Available | Positive | 1712297 - 1714441 | 73152.1 |
| enoyl-coa hydratase | SAMN05660350_01666 | Not Available | Positive | 1714492 - 1715229 | 26010.8 |
| acyl-coa dehydrogenase | SAMN05660350_01667 | Not Available | Positive | 1715293 - 1716429 | 40754.3 |
| acyl-coa dehydrogenase | SAMN05660350_01668 | Not Available | Positive | 1716426 - 1717523 | 37449.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

