Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, 4tm/12tm fusion protein | SAMN05660350_01649 | Not Available | Positive | 1694315 - 1696549 | 79254.5 |
| hypothetical protein | SAMN05660350_01650 | Not Available | Positive | 1696546 - 1697397 | 29389.2 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05660350_01651 | Not Available | Positive | 1697394 - 1699592 | 75463.9 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_01652 | Not Available | Positive | 1699585 - 1700907 | 43840.7 |
| regulator of rnase e activity rraa | SAMN05660350_01653 | Not Available | Positive | 1700919 - 1701602 | 22869.5 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05660350_01654 | Not Available | Positive | 1701599 - 1702480 | 29941.2 |
| protein of unknown function | SAMN05660350_01655 | Not Available | Negative | 1702575 - 1704065 | 52692.8 |
| hypothetical protein | SAMN05660350_01656 | Not Available | Positive | 1704257 - 1704694 | 14739.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05660350_01657 | Not Available | Positive | 1704762 - 1705457 | 23607.9 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_01658 | Not Available | Negative | 1705475 - 1706698 | 40377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

