Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | SAMN05660350_01599 | Not Available | Positive | 1641348 - 1642208 | 30568.6 |
| branched-chain amino acid transport system permease protein | SAMN05660350_01600 | Not Available | Positive | 1642205 - 1643095 | 30590.5 |
| branched-chain amino acid transport system permease protein | SAMN05660350_01601 | Not Available | Positive | 1643088 - 1644341 | 43156.9 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05660350_01602 | Not Available | Positive | 1644338 - 1645585 | 42726.0 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_01603 | Not Available | Negative | 1645724 - 1646860 | 37336.4 |
| acetyl-coa c-acetyltransferase | SAMN05660350_01604 | Not Available | Positive | 1647002 - 1648213 | 42328.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05660350_01605 | Not Available | Positive | 1648299 - 1649066 | 26505.4 |
| uncharacterized membrane protein | SAMN05660350_01606 | Not Available | Negative | 1649094 - 1650458 | 49386.4 |
| protein of unknown function | SAMN05660350_01607 | Not Available | Negative | 1650469 - 1651335 | 30164.9 |
| protein of unknown function | SAMN05660350_01608 | Not Available | Negative | 1651360 - 1652205 | 28801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

