Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05660350_01579 | Not Available | Positive | 1616994 - 1617974 | 34420.0 |
| caax protease self-immunity | SAMN05660350_01580 | Not Available | Positive | 1618006 - 1618800 | 27404.9 |
| dna polymerase iii, alpha subunit | SAMN05660350_01581 | Not Available | Positive | 1619149 - 1622703 | 129852.0 |
| hypothetical protein | SAMN05660350_01582 | Not Available | Positive | 1622794 - 1623450 | 21824.7 |
| hypothetical protein | SAMN05660350_01583 | Not Available | Negative | 1623588 - 1624385 | 28555.1 |
| histidinol dehydrogenase | SAMN05660350_01584 | Not Available | Positive | 1624493 - 1625797 | 44772.5 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05660350_01585 | Not Available | Positive | 1625794 - 1626927 | 40320.9 |
| imidazoleglycerol-phosphate dehydratase | SAMN05660350_01586 | Not Available | Positive | 1626924 - 1627520 | 21390.4 |
| hypothetical protein | SAMN05660350_01587 | Not Available | Positive | 1627548 - 1627724 | 5966.51 |
| protein of unknown function | SAMN05660350_01588 | Not Available | Negative | 1628017 - 1629240 | 42834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

