Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05660350_01539 | Not Available | Negative | 1568379 - 1568909 | 17996.5 |
| hypothetical protein | SAMN05660350_01540 | Not Available | Positive | 1569149 - 1569475 | 11992.1 |
| hypothetical protein | SAMN05660350_01541 | Not Available | Positive | 1569475 - 1569960 | 17001.2 |
| dna polymerase iii, alpha subunit | SAMN05660350_01542 | Not Available | Positive | 1569957 - 1573742 | 135937.0 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05660350_01543 | Not Available | Positive | 1573909 - 1574388 | 17583.7 |
| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase | SAMN05660350_01544 | Not Available | Positive | 1574518 - 1575276 | 25851.8 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05660350_01545 | Not Available | Positive | 1575273 - 1576478 | 41222.1 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05660350_01546 | Not Available | Positive | 1576578 - 1577837 | 44693.6 |
| hypothetical protein | SAMN05660350_01547 | Not Available | Negative | 1577847 - 1578788 | 33670.9 |
| cupin superfamily protein | SAMN05660350_01548 | Not Available | Negative | 1579039 - 1580037 | 35589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

