Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase | SAMN05660350_01519 | Not Available | Negative | 1549155 - 1550675 | 53681.3 |
| geranylgeranyl diphosphate synthase, type i | SAMN05660350_01520 | Not Available | Negative | 1550675 - 1551868 | 41354.0 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05660350_01521 | Not Available | Positive | 1551982 - 1552884 | 32751.1 |
| hypothetical protein | SAMN05660350_01522 | Not Available | Negative | 1552878 - 1553546 | 23413.3 |
| hypothetical protein | SAMN05660350_01523 | Not Available | Negative | 1553737 - 1554474 | 26502.2 |
| hypothetical protein | SAMN05660350_01524 | Not Available | Positive | 1554687 - 1555634 | 32713.7 |
| sigma e regulatory protein, mucb/rseb | SAMN05660350_01525 | Not Available | Positive | 1555771 - 1556877 | 37688.9 |
| abc-2 type transport system atp-binding protein | SAMN05660350_01526 | Not Available | Positive | 1556874 - 1557794 | 32381.6 |
| abc-2 type transport system permease protein | SAMN05660350_01527 | Not Available | Positive | 1557791 - 1558603 | 28148.1 |
| ribd c-terminal domain-containing protein | SAMN05660350_01528 | Not Available | Negative | 1558600 - 1559241 | 22583.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

