Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase 1 | SAMN05660350_01508 | Not Available | Positive | 1538781 - 1539803 | 35622.7 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05660350_01509 | Not Available | Positive | 1539982 - 1541319 | 48739.9 |
| l-threonine aldolase | SAMN05660350_01510 | Not Available | Positive | 1541374 - 1542384 | 35636.6 |
| endonuclease iv | SAMN05660350_01511 | Not Available | Negative | 1542485 - 1543375 | 30253.8 |
| serine/threonine protein kinase | SAMN05660350_01512 | Not Available | Negative | 1543399 - 1545384 | 70450.9 |
| serine hydroxymethyltransferase | SAMN05660350_01513 | Not Available | Negative | 1545599 - 1547113 | 53208.6 |
| hypothetical protein | SAMN05660350_01515 | Not Available | Positive | 1547303 - 1547626 | 11698.0 |
| lycopene cyclase domain-containing protein | SAMN05660350_01516 | Not Available | Positive | 1547652 - 1548002 | 12768.9 |
| lycopene cyclase domain-containing protein | SAMN05660350_01517 | Not Available | Positive | 1547999 - 1548346 | 12782.8 |
| phytoene synthase | SAMN05660350_01518 | Not Available | Negative | 1548205 - 1549158 | 35092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

