Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer with gaf sensor | SAMN05660350_01417 | Not Available | Negative | 1447061 - 1448611 | 53852.5 |
| iron-containing redox enzyme | SAMN05660350_01418 | Not Available | Negative | 1448752 - 1449774 | 36735.6 |
| short-chain dehydrogenase | SAMN05660350_01419 | Not Available | Positive | 1449840 - 1450688 | 29600.7 |
| 5'-nucleotidase | SAMN05660350_01420 | Not Available | Positive | 1450833 - 1452557 | 59071.4 |
| hypothetical protein | SAMN05660350_01421 | Not Available | Positive | 1452941 - 1453300 | 12520.9 |
| co or xanthine dehydrogenase, fad-binding subunit | SAMN05660350_01422 | Not Available | Positive | 1453405 - 1454265 | 30324.2 |
| carbon-monoxide dehydrogenase small subunit | SAMN05660350_01423 | Not Available | Positive | 1454265 - 1454735 | 16382.7 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05660350_01424 | Not Available | Positive | 1454732 - 1457053 | 81092.1 |
| methylthioribose-1-phosphate isomerase | SAMN05660350_01425 | Not Available | Positive | 1457050 - 1458084 | 36605.8 |
| l-fuculose-phosphate aldolase | SAMN05660350_01426 | Not Available | Positive | 1458081 - 1458722 | 22666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

