Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_01397 | Not Available | Negative | 1427881 - 1429026 | 40455.1 |
| cupin domain protein | SAMN05660350_01398 | Not Available | Positive | 1429036 - 1429617 | 21055.8 |
| hypothetical protein | SAMN05660350_01399 | Not Available | Positive | 1429661 - 1429843 | 7126.09 |
| reduced coenzyme f420:nadp oxidoreductase | SAMN05660350_01400 | Not Available | Positive | 1429977 - 1430672 | 23598.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN05660350_01401 | Not Available | Negative | 1430763 - 1431593 | 29233.1 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05660350_01402 | Not Available | Negative | 1431631 - 1433457 | 65185.1 |
| protein of unknown function | SAMN05660350_01403 | Not Available | Positive | 1433561 - 1433956 | 12779.5 |
| spfh domain, band 7 family protein | SAMN05660350_01404 | Not Available | Negative | 1433979 - 1434812 | 30118.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN05660350_01405 | Not Available | Negative | 1434979 - 1436001 | 34685.8 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_01406 | Not Available | Positive | 1436081 - 1436560 | 17735.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

