Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | SAMN05660350_00110 | Not Available | Negative | 95238 - 95432 | 7349.82 |
| hypothetical protein | SAMN05660350_00111 | Not Available | Negative | 95432 - 95851 | 14939.5 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN05660350_00112 | Not Available | Negative | 96232 - 98544 | 83039.9 |
| heme oxygenase | SAMN05660350_00113 | Not Available | Negative | 98541 - 99167 | 22186.1 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05660350_00114 | Not Available | Negative | 99233 - 100363 | 38640.1 |
| l-proline dehydrogenase | SAMN05660350_00115 | Not Available | Positive | 100487 - 101422 | 33218.9 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05660350_00116 | Not Available | Positive | 101434 - 103059 | 58152.4 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 102088 - 102204 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 102320 - 102396 | 18.01 |
| protein of unknown function, duf488 | SAMN05660350_00117 | Not Available | Negative | 103153 - 103680 | 18708.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

