Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05660350_01226 | Not Available | Positive | 1260846 - 1261844 | 35487.3 |
| predicted dehydrogenase | SAMN05660350_01227 | Not Available | Positive | 1261925 - 1262950 | 35283.0 |
| hypothetical protein | SAMN05660350_01228 | Not Available | Positive | 1262947 - 1263819 | 31700.7 |
| ribosomal protein s12 methylthiotransferase accessory factor | SAMN05660350_01229 | Not Available | Positive | 1263893 - 1265353 | 51877.4 |
| sugar phosphate isomerase/epimerase | SAMN05660350_01230 | Not Available | Positive | 1265350 - 1266186 | 29853.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05660350_01231 | Not Available | Positive | 1266183 - 1267391 | 42806.8 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05660350_01232 | Not Available | Positive | 1267388 - 1268101 | 24972.8 |
| amidase | SAMN05660350_01233 | Not Available | Positive | 1268098 - 1268451 | 12013.0 |
| hypothetical protein | SAMN05660350_01234 | Not Available | Negative | 1268470 - 1269084 | 21369.3 |
| dna-3-methyladenine glycosylase ii | SAMN05660350_01235 | Not Available | Positive | 1269268 - 1270755 | 51935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

