Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05660350_00100 | Not Available | Positive | 87394 - 87801 | 14494.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05660350_00101 | Not Available | Negative | 88019 - 88663 | 22789.5 |
| oxidoreductase molybdopterin binding domain-containing protein | SAMN05660350_00102 | Not Available | Negative | 88884 - 89660 | 28352.7 |
| transcriptional regulator, tetr family | SAMN05660350_00103 | Not Available | Positive | 89754 - 90302 | 20729.5 |
| hypothetical protein | SAMN05660350_00104 | Not Available | Positive | 90479 - 90832 | 13196.5 |
| hypothetical protein | SAMN05660350_00105 | Not Available | Positive | 91776 - 92186 | 14323.1 |
| cupin domain-containing protein | SAMN05660350_00106 | Not Available | Positive | 92218 - 92643 | 15397.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_00107 | Not Available | Negative | 92899 - 93780 | 31193.3 |
| hypothetical protein | SAMN05660350_00108 | Not Available | Positive | 93864 - 94316 | 13865.0 |
| catechol 2,3-dioxygenase | SAMN05660350_00109 | Not Available | Positive | 94480 - 94920 | 15149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

