Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_01166 | Not Available | Negative | 1199661 - 1200047 | 13082.6 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | SAMN05660350_01167 | Not Available | Negative | 1200044 - 1200928 | 31564.1 |
| oligopeptide transport system atp-binding protein | SAMN05660350_01168 | Not Available | Negative | 1201025 - 1202095 | 38878.4 |
| oligopeptide transport system atp-binding protein | SAMN05660350_01169 | Not Available | Negative | 1202088 - 1203140 | 37297.8 |
| oligopeptide transport system permease protein | SAMN05660350_01170 | Not Available | Negative | 1203137 - 1204087 | 33626.4 |
| oligopeptide transport system permease protein | SAMN05660350_01171 | Not Available | Negative | 1204080 - 1205003 | 33367.5 |
| oligopeptide transport system substrate-binding protein | SAMN05660350_01172 | Not Available | Negative | 1205140 - 1206801 | 59195.8 |
| csbd-like | SAMN05660350_01173 | Not Available | Positive | 1207142 - 1207312 | 5910.91 |
| 8-oxo-dgtp diphosphatase | SAMN05660350_01174 | Not Available | Negative | 1207425 - 1208186 | 27325.0 |
| transcriptional regulator, badm/rrf2 family | SAMN05660350_01175 | Not Available | Positive | 1208222 - 1208704 | 17172.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

