Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diviva domain-containing protein | SAMN05660350_01156 | Not Available | Negative | 1188661 - 1189026 | 12732.1 |
| hypothetical protein | SAMN05660350_01157 | Not Available | Negative | 1189189 - 1190028 | 30094.8 |
| succinyldiaminopimelate desuccinylase | SAMN05660350_01158 | Not Available | Negative | 1190025 - 1191137 | 38194.2 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05660350_01159 | Not Available | Positive | 1191344 - 1192318 | 33239.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_01160 | Not Available | Negative | 1192528 - 1193631 | 38228.3 |
| hypothetical protein | SAMN05660350_01161 | Not Available | Positive | 1193882 - 1194388 | 17940.2 |
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05660350_01162 | Not Available | Negative | 1194414 - 1195277 | 30582.6 |
| nad-dependent dihydropyrimidine dehydrogenase, prea subunit | SAMN05660350_01163 | Not Available | Negative | 1195532 - 1195858 | 11819.8 |
| acetyltransferase (gnat) family protein | SAMN05660350_01164 | Not Available | Positive | 1196013 - 1196765 | 26924.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_01165 | Not Available | Positive | 1196780 - 1199650 | 102948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

