Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc-finger | SAMN05660350_01126 | Not Available | Negative | 1158141 - 1158722 | 19289.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_01127 | Not Available | Negative | 1158719 - 1159309 | 21933.9 |
| predicted o-methyltransferase yrrm | SAMN05660350_01128 | Not Available | Positive | 1159581 - 1160231 | 21910.3 |
| 2'-5' rna ligase | SAMN05660350_01129 | Not Available | Negative | 1160344 - 1160922 | 20854.1 |
| glucose-1-phosphate adenylyltransferase | SAMN05660350_01130 | Not Available | Negative | 1160919 - 1162139 | 44101.4 |
| glycosyl transferase 4-like domain-containing protein | SAMN05660350_01131 | Not Available | Positive | 1162250 - 1162696 | 14998.6 |
| glycosyl transferases group 1 | SAMN05660350_01132 | Not Available | Positive | 1162660 - 1163289 | 21745.8 |
| glycosyl transferases group 1 | SAMN05660350_01133 | Not Available | Positive | 1163286 - 1163429 | 5111.14 |
| antar domain-containing protein | SAMN05660350_01134 | Not Available | Positive | 1163613 - 1164380 | 26585.7 |
| response regulator receiver domain-containing protein | SAMN05660350_01135 | Not Available | Positive | 1164562 - 1164987 | 14522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

