Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05660350_01116 | Not Available | Positive | 1150078 - 1150608 | 19844.7 |
| protein of unknown function | SAMN05660350_01117 | Not Available | Negative | 1150681 - 1151151 | 17310.9 |
| dna-binding transcriptional regulator, merr family | SAMN05660350_01118 | Not Available | Positive | 1151224 - 1151838 | 21664.1 |
| hypothetical protein | SAMN05660350_01119 | Not Available | Negative | 1151843 - 1152544 | 23113.5 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05660350_01120 | Not Available | Positive | 1152666 - 1153154 | 17130.6 |
| branched-chain amino acid transport protein (azld) | SAMN05660350_01121 | Not Available | Negative | 1153432 - 1153749 | 10432.1 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05660350_01122 | Not Available | Negative | 1153746 - 1154477 | 24388.0 |
| atp-binding protein involved in chromosome partitioning | SAMN05660350_01123 | Not Available | Positive | 1154760 - 1155911 | 39899.3 |
| sec-independent protein translocase protein tatb | SAMN05660350_01124 | Not Available | Negative | 1156068 - 1156430 | 12717.1 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05660350_01125 | Not Available | Negative | 1156531 - 1158108 | 52839.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

