Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase-1/2/3 large subunit | SAMN05660350_01106 | Not Available | Negative | 1140131 - 1141681 | 52384.7 |
| conserved hypothetical protein | SAMN05660350_01107 | Not Available | Negative | 1141678 - 1141998 | 11385.2 |
| nadph:quinone reductase | SAMN05660350_01108 | Not Available | Negative | 1142093 - 1143031 | 32329.5 |
| protein of unknown function | SAMN05660350_01109 | Not Available | Positive | 1143165 - 1143866 | 24875.2 |
| (2s)-methylsuccinyl-coa dehydrogenase | SAMN05660350_01110 | Not Available | Negative | 1144019 - 1145218 | 43445.5 |
| protein of unknown function | SAMN05660350_01111 | Not Available | Positive | 1145366 - 1145893 | 17371.5 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05660350_01112 | Not Available | Negative | 1145958 - 1146911 | 34111.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05660350_01113 | Not Available | Negative | 1146973 - 1147956 | 32899.2 |
| trans-2,3-dihydro-3-hydroxyanthranilate isomerase | SAMN05660350_01114 | Not Available | Negative | 1147953 - 1148822 | 29150.4 |
| mg/co/ni transporter mgte (contains cbs domain) | SAMN05660350_01115 | Not Available | Positive | 1148847 - 1150085 | 44984.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

