Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05660350_00090 | Not Available | Negative | 80031 - 80603 | 21695.4 |
| mfs transporter, putative metabolite:h+ symporter | SAMN05660350_00091 | Not Available | Negative | 80679 - 82016 | 46314.8 |
| hypothetical protein | SAMN05660350_00092 | Not Available | Negative | 82064 - 82249 | 6522.15 |
| snoal-like domain-containing protein | SAMN05660350_00093 | Not Available | Positive | 82311 - 82859 | 18881.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_00094 | Not Available | Negative | 82757 - 83590 | 29897.8 |
| isopentenyl-diphosphate delta-isomerase | SAMN05660350_00095 | Not Available | Positive | 83636 - 84265 | 23008.8 |
| tigr03083 family protein | SAMN05660350_00096 | Not Available | Negative | 84279 - 85013 | 25036.0 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05660350_00097 | Not Available | Positive | 85071 - 85886 | 28734.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05660350_00098 | Not Available | Positive | 86122 - 86901 | 27245.6 |
| hypothetical protein | SAMN05660350_00099 | Not Available | Positive | 86929 - 87213 | 9732.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

