Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ kinase | SAMN05660350_01064 | Not Available | Negative | 1097731 - 1098765 | 36436.2 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05660350_01065 | Not Available | Negative | 1098839 - 1099717 | 31069.0 |
| hypothetical protein | SAMN05660350_01066 | Not Available | Negative | 1099717 - 1099965 | 8823.22 |
| scp-2 sterol transfer family protein | SAMN05660350_01067 | Not Available | Positive | 1100157 - 1100495 | 12118.7 |
| haloacid dehalogenase superfamily class (subfamily) iia | SAMN05660350_01068 | Not Available | Negative | 1100671 - 1101750 | 35818.7 |
| tetratricopeptide repeat-containing protein | SAMN05660350_01069 | Not Available | Negative | 1101747 - 1102142 | 13854.2 |
| uncharacterized conserved protein, duf1015 family | SAMN05660350_01070 | Not Available | Positive | 1102251 - 1103540 | 44516.9 |
| single-strand dna-binding protein | SAMN05660350_01071 | Not Available | Negative | 1103549 - 1103905 | 13007.7 |
| hypothetical protein | SAMN05660350_01072 | Not Available | Negative | 1104005 - 1104838 | 29157.3 |
| patatin-related protein | SAMN05660350_01075 | Not Available | Negative | 1106889 - 1109345 | 87647.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

