Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05660350_01014 | Not Available | Positive | 1045537 - 1046991 | 51418.5 |
| hypothetical protein | SAMN05660350_01015 | Not Available | Negative | 1047414 - 1047683 | 9487.53 |
| regulator of rnase e activity rraa | SAMN05660350_01016 | Not Available | Negative | 1048174 - 1048818 | 22351.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05660350_01017 | Not Available | Negative | 1048861 - 1049844 | 34317.1 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN05660350_01018 | Not Available | Negative | 1049857 - 1051182 | 46412.4 |
| transcriptional regulator, iclr family | SAMN05660350_01019 | Not Available | Positive | 1051394 - 1052932 | 53655.5 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05660350_01020 | Not Available | Negative | 1053330 - 1054109 | 26676.6 |
| cgnr zinc finger domain-containing protein | SAMN05660350_01021 | Not Available | Positive | 1054176 - 1054796 | 21703.7 |
| protein of unknown function | SAMN05660350_01022 | Not Available | Negative | 1054884 - 1055420 | 18657.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05660350_01023 | Not Available | Negative | 1055467 - 1056987 | 50862.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

