Salinicoccus alkaliphilus DSM 16010

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Salinicoccaceae

Genus

Lacicoccus

Description

Salinicoccus alkaliphilus DSM 16010 is a notable species within the genus Salinicoccus, characterized by its unique adaptations to extreme environments. This bacterium possesses a single replicon, which is indicative of a streamlined genomic structure. The complete genome of Salinicoccus alkaliphilus is accessible under the accession number FRCF00000000.1, providing a resource for further genomic studies and understanding its biological functions. Salinicoccus alkaliphilus is particularly interesting due to its alkaliphilic nature, thriving in high-pH environments. This characteristic allows the organism to occupy niches that may be inhospitable to many other microbial species, showcasing its specialized metabolic pathways and physiological adaptations. The ability to survive and proliferate in alkaline conditions suggests potential applications in biotechnology and bioremediation, where such environments are prevalent. In a broader ecological context, Salinicoccus alkaliphilus contributes to the microbial diversity of alkaline habitats, playing a role in nutrient cycling and ecosystem dynamics. Its presence in these environments highlights the resilience of microbial life and the importance of extremophiles in maintaining ecological balance. Understanding this bacterium can provide insights into the evolutionary processes that enable life to thrive in extreme conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilySalinicoccaceae
GenusLacicoccus
SpeciesLacicoccus alkaliphilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinicoccus alkaliphilus DSM 16010 genome assembly, contig:

Gene Summary

Adenine Count

647137 bp

Thymine Count

654683 bp

Guanine Count

602812 bp

Cytosine Count

609801 bp

Genome Length

2516660 bp

Protein-coding Genes

2512 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc-finger of transposase is204/is1001/is1096/is1165SAMN02745189_02514Not AvailablePositive2420820 - 242128417682.4
transposaseSAMN02745189_02515Not AvailablePositive2421361 - 242238039857.9
uncharacterized proteinSAMN02745189_02516Not AvailableNegative2422463 - 242461981669.0
rna polymerase sigma-b factorSAMN02745189_02517Not AvailableNegative2424687 - 242546329542.1
serine/threonine-protein kinase rsbwSAMN02745189_02518Not AvailableNegative2425438 - 242591417648.7
anti-sigma b factor antagonistSAMN02745189_02519Not AvailableNegative2425916 - 242624212312.6
sigma-b regulation protein rsbu (phosphoserine phosphatase)SAMN02745189_02520Not AvailableNegative2426341 - 242739339763.4
mrna interferase mazfSAMN02745189_02521Not AvailableNegative2427386 - 242776313987.1
copg family transcriptional regulator / antitoxin endoaiSAMN02745189_02522Not AvailableNegative2427764 - 24279346510.76
alanine racemaseSAMN02745189_02523Not AvailableNegative2427998 - 242914642516.4

Displaying genes 2481 – 2490 of 2580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.