Salinicoccus alkaliphilus DSM 16010

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Salinicoccaceae

Genus

Lacicoccus

Description

Salinicoccus alkaliphilus DSM 16010 is a notable species within the genus Salinicoccus, characterized by its unique adaptations to extreme environments. This bacterium possesses a single replicon, which is indicative of a streamlined genomic structure. The complete genome of Salinicoccus alkaliphilus is accessible under the accession number FRCF00000000.1, providing a resource for further genomic studies and understanding its biological functions. Salinicoccus alkaliphilus is particularly interesting due to its alkaliphilic nature, thriving in high-pH environments. This characteristic allows the organism to occupy niches that may be inhospitable to many other microbial species, showcasing its specialized metabolic pathways and physiological adaptations. The ability to survive and proliferate in alkaline conditions suggests potential applications in biotechnology and bioremediation, where such environments are prevalent. In a broader ecological context, Salinicoccus alkaliphilus contributes to the microbial diversity of alkaline habitats, playing a role in nutrient cycling and ecosystem dynamics. Its presence in these environments highlights the resilience of microbial life and the importance of extremophiles in maintaining ecological balance. Understanding this bacterium can provide insights into the evolutionary processes that enable life to thrive in extreme conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilySalinicoccaceae
GenusLacicoccus
SpeciesLacicoccus alkaliphilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinicoccus alkaliphilus DSM 16010 genome assembly, contig:

Gene Summary

Adenine Count

647137 bp

Thymine Count

654683 bp

Guanine Count

602812 bp

Cytosine Count

609801 bp

Genome Length

2516660 bp

Protein-coding Genes

2512 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-oxalocrotonate tautomeraseSAMN02745189_01760Not AvailablePositive1683312 - 16835036989.55
dna-binding transcriptional regulator, lysr familySAMN02745189_01761Not AvailableNegative1683559 - 168444933740.9
2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenaseSAMN02745189_01762Not AvailablePositive1684909 - 168569428033.3
p-cumate 2,3-dioxygenase alpha subunitSAMN02745189_01763Not AvailablePositive1685723 - 168700048973.6
p-cumate 2,3-dioxygenase beta subunitSAMN02745189_01764Not AvailablePositive1686997 - 168748518945.6
thioredoxin reductase (nadph)SAMN02745189_01765Not AvailablePositive1687521 - 168854937739.8
catechol 2,3-dioxygenaseSAMN02745189_01766Not AvailablePositive1688606 - 168961638959.7
aminocarboxymuconate-semialdehyde decarboxylaseSAMN02745189_01767Not AvailablePositive1689738 - 169070036335.4
4fe-4s binding domain-containing proteinSAMN02745189_01768Not AvailablePositive1690777 - 16910108296.71
hypothetical proteinSAMN02745189_01769Not AvailableNegative1691123 - 169191729341.2

Displaying genes 1741 – 1750 of 2580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.