Micrococcus luteus strain VTM4R57

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Micrococcus

Description

Micrococcus luteus strain VTM4R57 is a Gram-positive, non-motile cocci bacterium that typically exhibits a tetrad cell arrangement. This strain is aerobe, which means it requires oxygen for growth and metabolism. It thrives optimally at a temperature of 29 degrees Celsius and falls within the mesophilic temperature range. Micrococcus luteus strain VTM4R57 possesses one replicon and a single membrane, indicative of its simple cellular structure. This strain is classified as free-living and has been found in diverse habitats, including those associated with humans (Homo sapiens) and wheat (Triticum aestivum). It has been associated with several health conditions, including bacteremia, peritonitis, peritoneal dialysis infections, sepsis, and osteoarthritis (OA), particularly knee OA. The pathogenicity of Micrococcus luteus strain VTM4R57 in humans highlights its potential implications in clinical settings and the need for further understanding of its role in infections. In terms of ecological significance, the presence of Micrococcus luteus in both human and plant environments suggests a versatile adaptability, which may play a role in the microbial dynamics of these ecosystems. Its ability to inhabit different niches could influence both health and disease in humans, as well as interactions within agricultural systems. Understanding the behavior and effects of this strain can provide insight into the broader ecological roles of microorganisms in health and disease contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusMicrococcus
SpeciesMicrococcus luteus
Strainstrain VTM4R57

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Micrococcus luteus strain VTM4R57
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature29
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Lasius niger
Cell arrangementTetrads
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Micrococcus luteus strain VTM4R57 genome assembly, contig:

Gene Summary

Adenine Count

346599 bp

Thymine Count

349056 bp

Guanine Count

937810 bp

Cytosine Count

928540 bp

Genome Length

2562419 bp

Protein-coding Genes

2330 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction dna helicase subunit ruvbSAMN04487849_10472Not AvailableNegative919780 - 92080236637.4
holliday junction dna helicase subunit ruvaSAMN04487849_10473Not AvailableNegative920799 - 92144322572.1
holliday junction endonuclease ruvcSAMN04487849_10474Not AvailableNegative921524 - 92215921612.8
dna-binding regulatory protein, yebc/pmpr familySAMN04487849_10475Not AvailableNegative922207 - 92296826780.3
peptidyl-dipeptidase dcpSAMN04487849_10476Not AvailablePositive923068 - 92516174660.5
alpha/beta hydrolase family proteinSAMN04487849_10477Not AvailableNegative925168 - 92656850126.5
peptide-methionine (r)-s-oxide reductaseSAMN04487849_10478Not AvailablePositive926656 - 92717118854.8
protein of unknown functionSAMN04487849_10479Not AvailablePositive927247 - 92786121389.2
ribonuclease dSAMN04487849_10480Not AvailablePositive927933 - 92918344721.5
3-hydroxyacyl-coa dehydrogenaseSAMN04487849_10481Not AvailablePositive929260 - 93143176595.8

Displaying genes 841 – 850 of 2381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Peritoneal dialysis infectionCausesPMC10292988
BacteremiaCausesPMC10292988
PeritonitisCausesPMC10292988
OaCausesPMC12866835
Knee oaCausesPMC12866835
SepsisCausesPMC12866835

Displaying health effects 1 – 6 of 6 in total