Halomonas cupida strain DSM 4740

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halomonas

Description

Halomonas cupida strain DSM 4740 is a notable halotolerant bacterium characterized by the presence of flagella, which suggests motility and adaptability in saline environments. This strain is distinguished by having a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in resource utilization and survival in extreme conditions. The accession number for Halomonas cupida strain DSM 4740 is FRCA00000000.1, which provides a reference for genomic information and further studies relevant to its biology. The presence of flagella is particularly significant in understanding the organism's ecological role, as motility can influence nutrient acquisition and colonization in its saline habitat. Overall, Halomonas cupida strain DSM 4740 exemplifies the adaptations of microorganisms to extreme environments, specifically high salinity. Its motility may enhance its ability to thrive in competitive settings, possibly leading to insights into microbial interactions and community dynamics in hypersaline ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalomonas
SpeciesHalomonas cupida
Strainstrain DSM 4740

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Halomonas cupida strain DSM 4740
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatEgyptian soil; German soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halomonas cupida strain DSM 4740 genome assembly, contig:

Gene Summary

Adenine Count

1005051 bp

Thymine Count

993829 bp

Guanine Count

1468629 bp

Cytosine Count

1485549 bp

Genome Length

4957973 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane usher proteinSAMN05660971_00178Not AvailablePositive218279 - 22093395452.2
chaperone protein ecpdSAMN05660971_00179Not AvailablePositive221045 - 22182127902.2
pilin (type 1 fimbria component protein)SAMN05660971_00180Not AvailablePositive221882 - 22293736729.2
pilin (type 1 fimbria component protein)SAMN05660971_00181Not AvailablePositive223313 - 22422431647.9
glutamate carboxypeptidaseSAMN05660971_00182Not AvailablePositive224774 - 22602144842.3
multidrug efflux pumpSAMN05660971_00183Not AvailableNegative226117 - 229248112843.0
membrane fusion protein, multidrug efflux systemSAMN05660971_00184Not AvailableNegative229248 - 23040841972.6
hypothetical proteinSAMN05660971_00185Not AvailablePositive230712 - 23189342419.8
rna polymerase sigma-70 factor, ecf subfamilySAMN05660971_00186Not AvailablePositive232084 - 23265621467.8
ca-activated chloride channel family proteinSAMN05660971_00187Not AvailablePositive232653 - 23492681348.1

Displaying genes 251 – 260 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.