Chitinophaga jiangningensis strain DSM 27406

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga jiangningensis strain DSM 27406 is a Gram-negative, rod-shaped bacterium. This strain has been designated with the accession number FRBL00000000.1, which provides a reference for its genomic data. Notably, Chitinophaga jiangningensis possesses a single replicon, indicating a streamlined genetic structure. As a member of the Chitinophaga genus, this bacterium is expected to have a role in the decomposition of chitin, a biopolymer found in the exoskeletons of arthropods and cell walls of fungi. This characteristic suggests that Chitinophaga jiangningensis may contribute to nutrient cycling in its natural environment, particularly in ecosystems rich in chitinous materials. Understanding the traits of Chitinophaga jiangningensis can provide insights into its ecological functions, particularly in the soil microbiome or aquatic systems where chitin sources are prevalent. Such bacteria are integral to the breakdown of complex organic materials, thereby supporting soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga jiangningensis
Strainstrain DSM 27406

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga jiangningensis strain DSM 27406


Gene Summary

Adenine Count

1883083 bp

Thymine Count

1895303 bp

Guanine Count

1684162 bp

Cytosine Count

1719587 bp

Genome Length

7182135 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive1 - 9018.01
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive6 - 11718.01
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive82 - 161418.01
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive208 - 303618.01
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive291 - 40218.01
regulator of sigma e proteaseSAMN05444266_1011Not AvailableNegative122 - 146249907.0
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN05444266_1012Not AvailableNegative1551 - 271742641.3
gh3 auxin-responsive promoterSAMN05444266_1013Not AvailableNegative2813 - 430957004.3
lsu ribosomal protein l21pSAMN05444266_1014Not AvailablePositive4593 - 489511204.8
large subunit ribosomal protein l27SAMN05444266_1015Not AvailablePositive4952 - 52309838.72

Displaying genes 1 – 10 of 5857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.