Chitinophaga jiangningensis strain DSM 27406

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga jiangningensis strain DSM 27406 is a Gram-negative, rod-shaped bacterium. This strain has been designated with the accession number FRBL00000000.1, which provides a reference for its genomic data. Notably, Chitinophaga jiangningensis possesses a single replicon, indicating a streamlined genetic structure. As a member of the Chitinophaga genus, this bacterium is expected to have a role in the decomposition of chitin, a biopolymer found in the exoskeletons of arthropods and cell walls of fungi. This characteristic suggests that Chitinophaga jiangningensis may contribute to nutrient cycling in its natural environment, particularly in ecosystems rich in chitinous materials. Understanding the traits of Chitinophaga jiangningensis can provide insights into its ecological functions, particularly in the soil microbiome or aquatic systems where chitin sources are prevalent. Such bacteria are integral to the breakdown of complex organic materials, thereby supporting soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga jiangningensis
Strainstrain DSM 27406

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga jiangningensis strain DSM 27406 genome assembly,

Gene Summary

Adenine Count

1883083 bp

Thymine Count

1895303 bp

Guanine Count

1684162 bp

Cytosine Count

1719587 bp

Genome Length

7182135 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, deor familySAMN05444266_101689Not AvailableNegative823684 - 82446928846.3
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05444266_101690Not AvailableNegative824515 - 82697791976.3
2-polyprenyl-6-methoxyphenol hydroxylaseSAMN05444266_101691Not AvailableNegative827113 - 82825842675.9
uncharacterized conserved protein yndb, ahsa1/start domainSAMN05444266_101692Not AvailablePositive828361 - 82874714819.2
smi1-knr4 cell-wallSAMN05444266_101693Not AvailableNegative828804 - 82944524609.0
calcineurin-like phosphoesteraseSAMN05444266_101694Not AvailableNegative829512 - 83034531156.9
malate dehydrogenase (quinone)SAMN05444266_101695Not AvailablePositive830673 - 83218756385.7
hypothetical proteinSAMN05444266_101696Not AvailableNegative832091 - 8322947466.28
alpha-l-fucosidaseSAMN05444266_101697Not AvailablePositive832450 - 83384451677.5
polygalacturonaseSAMN05444266_101698Not AvailablePositive833949 - 83547254867.6

Displaying genes 691 – 700 of 5857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.