Chitinophaga jiangningensis strain DSM 27406

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga jiangningensis strain DSM 27406 is a Gram-negative, rod-shaped bacterium. This strain has been designated with the accession number FRBL00000000.1, which provides a reference for its genomic data. Notably, Chitinophaga jiangningensis possesses a single replicon, indicating a streamlined genetic structure. As a member of the Chitinophaga genus, this bacterium is expected to have a role in the decomposition of chitin, a biopolymer found in the exoskeletons of arthropods and cell walls of fungi. This characteristic suggests that Chitinophaga jiangningensis may contribute to nutrient cycling in its natural environment, particularly in ecosystems rich in chitinous materials. Understanding the traits of Chitinophaga jiangningensis can provide insights into its ecological functions, particularly in the soil microbiome or aquatic systems where chitin sources are prevalent. Such bacteria are integral to the breakdown of complex organic materials, thereby supporting soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga jiangningensis
Strainstrain DSM 27406

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga jiangningensis strain DSM 27406 genome assembly,

Gene Summary

Adenine Count

1883083 bp

Thymine Count

1895303 bp

Guanine Count

1684162 bp

Cytosine Count

1719587 bp

Genome Length

7182135 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine betaine/proline transport system permease proteinSAMN05444266_11021Not AvailablePositive6047191 - 604801529540.1
glycine betaine/proline transport system substrate-binding proteinSAMN05444266_11022Not AvailablePositive6048028 - 604887631261.6
right handed beta helix regionSAMN05444266_11023Not AvailableNegative6048960 - 605123985258.6
atp-dependent clp protease atp-binding subunit clpbSAMN05444266_11024Not AvailablePositive6051441 - 605404197432.0
trna(arg) a34 adenosine deaminase tadaSAMN05444266_11025Not AvailablePositive6054143 - 605462217794.3
putative zinc-fingerSAMN05444266_11026Not AvailableNegative6055079 - 605543813951.0
rna polymerase sigma-70 factor, ecf subfamilySAMN05444266_11027Not AvailableNegative6055454 - 605603522948.8
tola-binding proteinSAMN05444266_11028Not AvailableNegative6056159 - 605725640307.1
rna polymerase sigma factor, sigma-70 familySAMN05444266_11029Not AvailableNegative6057246 - 605782122242.8
cell wall-associated hydrolase, nlpc familySAMN05444266_11030Not AvailablePositive6057914 - 605868428797.4

Displaying genes 4941 – 4950 of 5857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.