Chitinophaga jiangningensis strain DSM 27406

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga jiangningensis strain DSM 27406 is a Gram-negative, rod-shaped bacterium. This strain has been designated with the accession number FRBL00000000.1, which provides a reference for its genomic data. Notably, Chitinophaga jiangningensis possesses a single replicon, indicating a streamlined genetic structure. As a member of the Chitinophaga genus, this bacterium is expected to have a role in the decomposition of chitin, a biopolymer found in the exoskeletons of arthropods and cell walls of fungi. This characteristic suggests that Chitinophaga jiangningensis may contribute to nutrient cycling in its natural environment, particularly in ecosystems rich in chitinous materials. Understanding the traits of Chitinophaga jiangningensis can provide insights into its ecological functions, particularly in the soil microbiome or aquatic systems where chitin sources are prevalent. Such bacteria are integral to the breakdown of complex organic materials, thereby supporting soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga jiangningensis
Strainstrain DSM 27406

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga jiangningensis strain DSM 27406 genome assembly,

Gene Summary

Adenine Count

1883083 bp

Thymine Count

1895303 bp

Guanine Count

1684162 bp

Cytosine Count

1719587 bp

Genome Length

7182135 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseSAMN05444266_101348Not AvailableNegative417399 - 41824131689.8
hypothetical proteinSAMN05444266_101349Not AvailableNegative418270 - 41950546196.8
heparinase ii/iii-like proteinSAMN05444266_101350Not AvailableNegative419886 - 42184773432.5
altronate hydrolaseSAMN05444266_101351Not AvailablePositive422215 - 42386159092.3
hypothetical proteinSAMN05444266_101352Not AvailablePositive424009 - 4241284350.37
predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 familySAMN05444266_101353Not AvailablePositive424152 - 42484427598.1
mfs transporter, acs family, hexuronate transporterSAMN05444266_101354Not AvailableNegative425154 - 42649449265.4
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN05444266_101355Not AvailableNegative426530 - 42719223612.8
2-dehydro-3-deoxygluconokinaseSAMN05444266_101356Not AvailableNegative427195 - 42819336699.6
d-glucuronate isomeraseSAMN05444266_101357Not AvailableNegative428193 - 42958752825.3

Displaying genes 351 – 360 of 5857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.