Prevotella ruminicola strain KHT3

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Prevotella ruminicola strain KHT3 is a Gram-negative, non-motile, rod-shaped bacterium that is classified as an anaerobe, thriving in environments devoid of oxygen. This strain is mesophilic, indicating its optimal growth occurs at moderate temperatures. It possesses a single replicon and is characterized by a double-membrane structure, typical of Gram-negative bacteria. The habitat of Prevotella ruminicola strain KHT3 is associated with hosts, specifically Homo sapiens. This bacterium is free-living, suggesting it can exist independently within the host's microbiome. Notably, it does not undergo sporulation, which is a significant trait for understanding its survival mechanisms and ecological interactions. The presence of Prevotella ruminicola in the human microbiome is of interest, as members of the Prevotella genus are known to play roles in gut health and digestion. Their metabolic activities can influence the host's nutrient absorption and immune response. The strain's ability to thrive in anaerobic conditions reflects its adaptation to the gut environment, where oxygen levels are low. Understanding the characteristics of Prevotella ruminicola strain KHT3 contributes to the broader knowledge of microbial communities in human hosts and highlights the importance of anaerobic bacteria in maintaining gut health and function. Accessions for this strain are available under the identifier FRBD00000000.1, facilitating further research into its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella ruminicola strain KHT3 genome assembly, contig:

Gene Summary

Adenine Count

1067962 bp

Thymine Count

1060583 bp

Guanine Count

912222 bp

Cytosine Count

920732 bp

Genome Length

3961687 bp

Protein-coding Genes

3446 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive1 - 152818.01
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive2 - 136018.01
dna-binding protein, histone-like, putativeSAMN05216463_1011Not AvailablePositive160 - 66017831.3
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive189 - 30118.01
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive200 - 31218.01
hypothetical proteinSAMN05216463_1012Not AvailablePositive724 - 8253401.37
myo-inositol-1-phosphate synthaseSAMN05216463_1013Not AvailableNegative898 - 222649628.7
iron complex outermembrane recepter proteinSAMN05216463_1014Not AvailablePositive2405 - 453479467.6
chromosomal replication initiator proteinSAMN05216463_1015Not AvailableNegative4674 - 609553748.8
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05216463_1016Not AvailableNegative6412 - 731432559.6

Displaying genes 1 – 10 of 3507 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.