Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1067962 bp
Thymine Count
1060583 bp
Guanine Count
912222 bp
Cytosine Count
920732 bp
Genome Length
3961687 bp
Protein-coding Genes
3446 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 37950 - 38062 | 18.01 |
| beta-galactosidase | SAMN05216463_10127 | Not Available | Negative | 37884 - 40193 | 86999.5 |
| alpha-glucuronidase | SAMN05216463_10128 | Not Available | Positive | 40304 - 42202 | 72183.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216463_10129 | Not Available | Negative | 42222 - 43295 | 39909.5 |
| glucose-1-phosphate thymidylyltransferase | SAMN05216463_10130 | Not Available | Negative | 43344 - 44075 | 27470.0 |
| galactokinase/galacturonokinase | SAMN05216463_10131 | Not Available | Negative | 44167 - 45360 | 45093.0 |
| superoxide dismutase, fe-mn family | SAMN05216463_10132 | Not Available | Negative | 45427 - 46011 | 21664.9 |
| hypothetical protein | SAMN05216463_10133 | Not Available | Positive | 46595 - 46960 | 13581.8 |
| hypothetical protein | SAMN05216463_10134 | Not Available | Negative | 47194 - 48504 | 48488.7 |
| hypothetical protein | SAMN05216463_10135 | Not Available | Negative | 48812 - 49045 | 8904.94 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
