Prevotella ruminicola strain KHT3

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Prevotella ruminicola strain KHT3 is a Gram-negative, non-motile, rod-shaped bacterium that is classified as an anaerobe, thriving in environments devoid of oxygen. This strain is mesophilic, indicating its optimal growth occurs at moderate temperatures. It possesses a single replicon and is characterized by a double-membrane structure, typical of Gram-negative bacteria. The habitat of Prevotella ruminicola strain KHT3 is associated with hosts, specifically Homo sapiens. This bacterium is free-living, suggesting it can exist independently within the host's microbiome. Notably, it does not undergo sporulation, which is a significant trait for understanding its survival mechanisms and ecological interactions. The presence of Prevotella ruminicola in the human microbiome is of interest, as members of the Prevotella genus are known to play roles in gut health and digestion. Their metabolic activities can influence the host's nutrient absorption and immune response. The strain's ability to thrive in anaerobic conditions reflects its adaptation to the gut environment, where oxygen levels are low. Understanding the characteristics of Prevotella ruminicola strain KHT3 contributes to the broader knowledge of microbial communities in human hosts and highlights the importance of anaerobic bacteria in maintaining gut health and function. Accessions for this strain are available under the identifier FRBD00000000.1, facilitating further research into its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella ruminicola strain KHT3 genome assembly, contig:

Gene Summary

Adenine Count

1067962 bp

Thymine Count

1060583 bp

Guanine Count

912222 bp

Cytosine Count

920732 bp

Genome Length

3961687 bp

Protein-coding Genes

3446 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
small subunit ribosomal protein s15SAMN05216463_10117Not AvailablePositive20048 - 2031710385.7
outer membrane receptor proteins, mostly fe transportSAMN05216463_10118Not AvailableNegative20476 - 2288789428.6
atp-dependent clp protease atp-binding subunit clpbSAMN05216463_10119Not AvailablePositive23087 - 2561895019.7
m6 family metalloprotease domain-containing proteinSAMN05216463_10120Not AvailableNegative25601 - 2711557087.4
fumarase, class i, homodimericSAMN05216463_10121Not AvailableNegative27131 - 2878060325.4
predicted zn-dependent peptidaseSAMN05216463_10122Not AvailableNegative28816 - 31719110881.0
protein of unknown functionSAMN05216463_10123Not AvailableNegative31750 - 3365471720.3
gtp-binding protein hflxSAMN05216463_10124Not AvailableNegative33605 - 3493650504.5
glucosamine-6-phosphate deaminaseSAMN05216463_10125Not AvailablePositive35073 - 3586729294.9
glycosyl-hydrolase 97 c-terminal, oligomerisationSAMN05216463_10126Not AvailablePositive35870 - 3781673133.5

Displaying genes 21 – 30 of 3507 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.