Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1067962 bp
Thymine Count
1060583 bp
Guanine Count
912222 bp
Cytosine Count
920732 bp
Genome Length
3961687 bp
Protein-coding Genes
3446 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s15 | SAMN05216463_10117 | Not Available | Positive | 20048 - 20317 | 10385.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216463_10118 | Not Available | Negative | 20476 - 22887 | 89428.6 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216463_10119 | Not Available | Positive | 23087 - 25618 | 95019.7 |
| m6 family metalloprotease domain-containing protein | SAMN05216463_10120 | Not Available | Negative | 25601 - 27115 | 57087.4 |
| fumarase, class i, homodimeric | SAMN05216463_10121 | Not Available | Negative | 27131 - 28780 | 60325.4 |
| predicted zn-dependent peptidase | SAMN05216463_10122 | Not Available | Negative | 28816 - 31719 | 110881.0 |
| protein of unknown function | SAMN05216463_10123 | Not Available | Negative | 31750 - 33654 | 71720.3 |
| gtp-binding protein hflx | SAMN05216463_10124 | Not Available | Negative | 33605 - 34936 | 50504.5 |
| glucosamine-6-phosphate deaminase | SAMN05216463_10125 | Not Available | Positive | 35073 - 35867 | 29294.9 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05216463_10126 | Not Available | Positive | 35870 - 37816 | 73133.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
