Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN02745181_1004 | Not Available | Positive | 1000428 - 1001507 | 39369.1 |
| protein of unknown function | SAMN02745181_1005 | Not Available | Positive | 1001644 - 1003116 | 55268.1 |
| caspase domain-containing protein | SAMN02745181_1006 | Not Available | Positive | 1003156 - 1008219 | 189368.0 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN02745181_1007 | Not Available | Negative | 1008285 - 1010324 | 75037.0 |
| uncharacterized conserved protein ybap, trab family | SAMN02745181_1008 | Not Available | Negative | 1010454 - 1011407 | 36670.2 |
| hypothetical protein | SAMN02745181_1009 | Not Available | Negative | 1011413 - 1012210 | 28660.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN02745181_1010 | Not Available | Positive | 1012334 - 1013734 | 53439.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN02745181_1011 | Not Available | Positive | 1013736 - 1014572 | 30460.2 |
| hypothetical protein | SAMN02745181_1012 | Not Available | Positive | 1014573 - 1014944 | 13746.9 |
| septum formation protein | SAMN02745181_1013 | Not Available | Positive | 1014972 - 1015544 | 21321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
