Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN02745181_0983 | Not Available | Negative | 983266 - 983544 | 10337.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745181_0985 | Not Available | Positive | 984771 - 985433 | 25390.7 |
| fecr family protein | SAMN02745181_0986 | Not Available | Positive | 985439 - 987013 | 58183.2 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0987 | Not Available | Positive | 987083 - 987850 | 26643.8 |
| dtdp-glucose 4,6-dehydratase | SAMN02745181_0988 | Not Available | Negative | 987924 - 988871 | 34733.4 |
| blar1 peptidase m56 | SAMN02745181_0989 | Not Available | Negative | 988884 - 989783 | 33084.1 |
| predicted transcriptional regulator | SAMN02745181_0990 | Not Available | Negative | 989906 - 990283 | 14387.3 |
| hypothetical protein | SAMN02745181_0991 | Not Available | Positive | 990389 - 991216 | 29701.3 |
| hypothetical protein | SAMN02745181_0992 | Not Available | Negative | 991313 - 991642 | 12156.5 |
| l-serine ammonia-lyase | SAMN02745181_0993 | Not Available | Negative | 992002 - 993381 | 48777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
