Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted permease yjgp/yjgq family protein | SAMN02745181_0963 | Not Available | Negative | 957958 - 959310 | 50662.0 |
| membrane associated serine protease, rhomboid family | SAMN02745181_0964 | Not Available | Positive | 959422 - 960267 | 30860.1 |
| xtp/ditp diphosphohydrolase | SAMN02745181_0965 | Not Available | Positive | 960242 - 961087 | 32120.9 |
| pas domain s-box-containing protein | SAMN02745181_0966 | Not Available | Positive | 961163 - 962758 | 60783.9 |
| pas domain s-box-containing protein | SAMN02745181_0967 | Not Available | Positive | 962742 - 964361 | 60816.2 |
| hypothetical protein | SAMN02745181_0968 | Not Available | Positive | 964536 - 968171 | 133370.0 |
| hypothetical protein | SAMN02745181_0969 | Not Available | Positive | 968205 - 968915 | 27090.8 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0970 | Not Available | Negative | 969013 - 969669 | 22306.7 |
| fecr family protein | SAMN02745181_0971 | Not Available | Negative | 969770 - 971260 | 55336.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745181_0972 | Not Available | Negative | 971275 - 971826 | 21331.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
