Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose o-acetyltransferase | SAMN02745181_0953 | Not Available | Positive | 949211 - 949783 | 20595.4 |
| arabinose-5-phosphate isomerase | SAMN02745181_0954 | Not Available | Negative | 949780 - 950745 | 33924.7 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN02745181_0955 | Not Available | Negative | 950812 - 952020 | 44905.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN02745181_0956 | Not Available | Positive | 952096 - 952860 | 27195.1 |
| hypothetical protein | SAMN02745181_0957 | Not Available | Positive | 952864 - 953679 | 30445.4 |
| hypothetical protein | SAMN02745181_0958 | Not Available | Negative | 953745 - 954119 | 13703.5 |
| probable fes assembly suf system protein suft | SAMN02745181_0959 | Not Available | Negative | 954151 - 954699 | 19517.4 |
| utp--glucose-1-phosphate uridylyltransferase | SAMN02745181_0960 | Not Available | Positive | 954942 - 956333 | 51203.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e/beta-phosphoglucomutase family hydrolase | SAMN02745181_0961 | Not Available | Positive | 956514 - 957131 | 22286.2 |
| hypothetical protein | SAMN02745181_0962 | Not Available | Negative | 957218 - 957913 | 26288.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
