Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconokinase | SAMN02745181_0933 | Not Available | Negative | 928550 - 929575 | 37034.8 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN02745181_0934 | Not Available | Negative | 929597 - 930214 | 21682.5 |
| laci family transcriptional regulator | SAMN02745181_0935 | Not Available | Positive | 930396 - 931553 | 43368.1 |
| 8-oxo-dgtp diphosphatase | SAMN02745181_0936 | Not Available | Positive | 931540 - 931974 | 16093.3 |
| predicted transcriptional regulator | SAMN02745181_0937 | Not Available | Positive | 932095 - 932490 | 14925.7 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN02745181_0938 | Not Available | Positive | 932499 - 934280 | 66176.5 |
| hypothetical protein | SAMN02745181_0939 | Not Available | Negative | 934283 - 935047 | 27991.8 |
| hypothetical protein | SAMN02745181_0940 | Not Available | Positive | 935110 - 935745 | 23821.8 |
| cardiolipin synthase | SAMN02745181_0941 | Not Available | Positive | 935794 - 937050 | 46844.7 |
| protein of unknown function | SAMN02745181_0942 | Not Available | Positive | 937092 - 938243 | 42472.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
