Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN02745181_0923 | Not Available | Positive | 921782 - 922363 | 21588.3 |
| protein of unknown function | SAMN02745181_0924 | Not Available | Positive | 922367 - 922777 | 14997.0 |
| hypothetical protein | SAMN02745181_0925 | Not Available | Negative | 922782 - 922931 | 5667.62 |
| hypothetical protein | SAMN02745181_0926 | Not Available | Negative | 922901 - 923293 | 14644.0 |
| hypothetical protein | SAMN02745181_0927 | Not Available | Negative | 923379 - 923969 | 21544.0 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN02745181_0928 | Not Available | Negative | 924015 - 924776 | 26838.9 |
| trap transporter, dctm subunit | SAMN02745181_0929 | Not Available | Negative | 924797 - 926080 | 44418.2 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN02745181_0930 | Not Available | Negative | 926096 - 926569 | 17302.8 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN02745181_0931 | Not Available | Negative | 926569 - 927600 | 38100.6 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN02745181_0932 | Not Available | Negative | 927691 - 928521 | 30900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
