Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase, gh35 family | SAMN02745181_0903 | Not Available | Negative | 889815 - 892436 | 96694.0 |
| hypothetical protein | SAMN02745181_0904 | Not Available | Positive | 892446 - 892580 | 4999.4 |
| hypothetical protein | SAMN02745181_0905 | Not Available | Negative | 892701 - 892895 | 7427.0 |
| hypothetical protein | SAMN02745181_0906 | Not Available | Negative | 892886 - 894055 | 43785.7 |
| predicted dehydrogenase | SAMN02745181_0907 | Not Available | Negative | 894092 - 895159 | 39413.4 |
| predicted dehydrogenase | SAMN02745181_0908 | Not Available | Negative | 895238 - 896527 | 47859.3 |
| nucleoside transporter | SAMN02745181_0909 | Not Available | Negative | 896702 - 898162 | 52247.3 |
| molecular chaperone dnak | SAMN02745181_0910 | Not Available | Positive | 898553 - 900469 | 67925.2 |
| four helix bundle protein | SAMN02745181_0911 | Not Available | Positive | 900551 - 900922 | 13920.6 |
| chaperonin groes | SAMN02745181_0912 | Not Available | Positive | 901026 - 901316 | 10038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
