Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | SAMN02745181_0862 | Not Available | Negative | 846660 - 846932 | 9877.98 |
| branched-chain amino acid aminotransferase | SAMN02745181_0863 | Not Available | Negative | 847401 - 848282 | 32137.7 |
| hypothetical protein | SAMN02745181_0864 | Not Available | Positive | 848392 - 848970 | 22125.7 |
| putative abc transport system atp-binding protein | SAMN02745181_0866 | Not Available | Negative | 849467 - 850123 | 23628.7 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN02745181_0867 | Not Available | Negative | 850154 - 851116 | 36672.3 |
| phosphoglucomutase | SAMN02745181_0868 | Not Available | Positive | 851147 - 853084 | 70655.7 |
| apolipoprotein n-acyltransferase | SAMN02745181_0869 | Not Available | Positive | 853162 - 855042 | 69913.4 |
| 8-amino-7-oxononanoate synthase | SAMN02745181_0870 | Not Available | Negative | 855039 - 856193 | 41185.1 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02745181_0871 | Not Available | Negative | 856220 - 857101 | 32303.7 |
| cytidine deaminase | SAMN02745181_0872 | Not Available | Negative | 857195 - 857581 | 13501.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
