Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase superfamily protein | SAMN02745181_0741 | Not Available | Positive | 715082 - 717985 | 105530.0 |
| putative capsular polysaccharide synthesis protein | SAMN02745181_0742 | Not Available | Positive | 718055 - 718849 | 31371.0 |
| thymidylate kinase | SAMN02745181_0743 | Not Available | Positive | 718945 - 720297 | 51588.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02745181_0744 | Not Available | Positive | 720294 - 721532 | 45846.4 |
| glycosyl transferase family 2 | SAMN02745181_0745 | Not Available | Positive | 721548 - 722375 | 32001.9 |
| phosphotransferase enzyme family protein | SAMN02745181_0746 | Not Available | Positive | 722372 - 723430 | 39778.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02745181_0747 | Not Available | Positive | 723406 - 724527 | 41595.5 |
| o-antigen ligase | SAMN02745181_0748 | Not Available | Positive | 724536 - 726701 | 80928.2 |
| asparagine synthase (glutamine-hydrolysing) | SAMN02745181_0749 | Not Available | Positive | 726723 - 728297 | 59622.2 |
| choline kinase | SAMN02745181_0750 | Not Available | Positive | 728294 - 729049 | 28148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
