Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase | SAMN02745181_0731 | Not Available | Positive | 702867 - 703973 | 39590.3 |
| udp-glucuronate decarboxylase | SAMN02745181_0732 | Not Available | Positive | 704012 - 704944 | 34796.5 |
| gdpmannose 4,6-dehydratase | SAMN02745181_0733 | Not Available | Positive | 704988 - 706103 | 42137.1 |
| gdp-l-fucose synthase | SAMN02745181_0734 | Not Available | Positive | 706136 - 707092 | 34709.2 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | SAMN02745181_0735 | Not Available | Positive | 707116 - 707862 | 28177.7 |
| hypothetical protein | SAMN02745181_0736 | Not Available | Positive | 707867 - 710197 | 85846.1 |
| hypothetical protein | SAMN02745181_0737 | Not Available | Positive | 710222 - 711742 | 56020.0 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN02745181_0738 | Not Available | Positive | 711774 - 713285 | 55967.8 |
| cryptococcal mannosyltransferase 1 | SAMN02745181_0739 | Not Available | Positive | 713298 - 714221 | 35692.7 |
| methyltransferase domain-containing protein | SAMN02745181_0740 | Not Available | Positive | 714245 - 715078 | 32359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
