Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase family associated with various cellular activities (aaa) | SAMN02745181_0660 | Not Available | Positive | 623978 - 629110 | 193146.0 |
| lysophospholipase l1 | SAMN02745181_0661 | Not Available | Negative | 629168 - 630229 | 39047.9 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN02745181_0662 | Not Available | Positive | 630699 - 633728 | 106523.0 |
| trehalose utilization protein | SAMN02745181_0663 | Not Available | Positive | 633847 - 634881 | 38577.4 |
| protein of unknown function | SAMN02745181_0664 | Not Available | Negative | 634884 - 635465 | 21523.4 |
| colanic acid biosynthesis protein wcah | SAMN02745181_0665 | Not Available | Negative | 635462 - 635947 | 17988.3 |
| hypothetical protein | SAMN02745181_0666 | Not Available | Positive | 636010 - 637038 | 40152.3 |
| 23s rrna pseudouridine2457 synthase | SAMN02745181_0667 | Not Available | Positive | 637041 - 637613 | 21310.0 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0668 | Not Available | Negative | 637690 - 638364 | 22974.7 |
| fecr family protein | SAMN02745181_0669 | Not Available | Negative | 638475 - 639998 | 56488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
