Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, badm/rrf2 family | SAMN02745181_0619 | Not Available | Positive | 578359 - 578835 | 17035.1 |
| hexosaminidase | SAMN02745181_0620 | Not Available | Negative | 578896 - 580788 | 71657.8 |
| t/g mismatch-specific endonuclease | SAMN02745181_0621 | Not Available | Positive | 580922 - 581416 | 19307.0 |
| hypothetical protein | SAMN02745181_0623 | Not Available | Positive | 582150 - 582425 | 10210.0 |
| putative restriction endonuclease | SAMN02745181_0624 | Not Available | Negative | 582376 - 583128 | 28323.7 |
| hypothetical protein | SAMN02745181_0625 | Not Available | Positive | 583222 - 583503 | 10661.7 |
| hypothetical protein | SAMN02745181_0626 | Not Available | Negative | 583524 - 584327 | 29076.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN02745181_0627 | Not Available | Negative | 584411 - 585094 | 25004.0 |
| hypothetical protein | SAMN02745181_0628 | Not Available | Negative | 585134 - 585919 | 28785.3 |
| hypothetical protein | SAMN02745181_0629 | Not Available | Negative | 586060 - 586842 | 28796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
