Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase a . metallo peptidase. merops family m03a | SAMN02745181_0074 | Not Available | Negative | 60975 - 63062 | 79196.2 |
| starch synthase | SAMN02745181_0075 | Not Available | Positive | 63310 - 64875 | 58530.9 |
| hypothetical protein | SAMN02745181_0076 | Not Available | Positive | 65176 - 65844 | 24987.5 |
| thiopurine s-methyltransferase (tpmt) | SAMN02745181_0077 | Not Available | Positive | 65896 - 66501 | 22667.2 |
| hypothetical protein | SAMN02745181_0078 | Not Available | Negative | 66565 - 67620 | 40642.2 |
| hypothetical protein | SAMN02745181_0079 | Not Available | Positive | 67863 - 68516 | 24510.8 |
| hamp domain-containing protein | SAMN02745181_0081 | Not Available | Positive | 69111 - 70874 | 66277.0 |
| hypothetical protein | SAMN02745181_0082 | Not Available | Positive | 70980 - 71381 | 14649.9 |
| iron complex outermembrane recepter protein | SAMN02745181_0083 | Not Available | Positive | 71523 - 73559 | 74629.4 |
| pepsy-associated tm region | SAMN02745181_0084 | Not Available | Positive | 73611 - 75038 | 53515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
