Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_0579 | Not Available | Negative | 534629 - 534778 | 5483.89 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0580 | Not Available | Negative | 534916 - 535695 | 27098.2 |
| hypothetical protein | SAMN02745181_0581 | Not Available | Negative | 535849 - 536019 | 6415.05 |
| hypothetical protein | SAMN02745181_0582 | Not Available | Negative | 536023 - 536466 | 16635.5 |
| fad dependent oxidoreductase | SAMN02745181_0583 | Not Available | Negative | 536511 - 538460 | 72124.4 |
| pep-cterm protein-sorting domain-containing protein/myxo-cterm domain-containing protein | SAMN02745181_0584 | Not Available | Negative | 538583 - 539302 | 24972.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745181_0585 | Not Available | Positive | 539441 - 539992 | 21063.9 |
| fecr family protein | SAMN02745181_0586 | Not Available | Positive | 539989 - 541581 | 57397.2 |
| hypothetical protein | SAMN02745181_0587 | Not Available | Positive | 541729 - 542454 | 26812.5 |
| tricorn protease | SAMN02745181_0588 | Not Available | Positive | 542911 - 546105 | 116643.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
